Peer-Reviewed Publications

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Current Number of Papers in Database: 1209
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Page 1 of 81

Mousa AA, Ramachandran R, Ozdemir O, Karsi A, Abdelhamed H (2021) Dietary trans-cinnamaldehyde improves oxidative stress response of channel catfish (Ictalurus punctatus) following Edwardsiella ictaluri infection. Aquaculture 532: 735985.

JOURNAL IMPACT INDEX: ‡ • DOI: 10.1016/j.aquaculture.2020.735985 • SCOPUS ID (EID): 2-s2.0-85092053759 • SCOPUS CITATION COUNT: 0

Commercial channel catfish (Ictalurus punctatus) is an economically valuable agricultural commodity in the United States, which suffers heavily from bacterial pathogens including Edwardsiella ictaluri. Our previous study revealed that dietary trans-cinnamaldehyde (TC) reduces catfish mortality after E. ictaluri infection, but there is limited knowledge of the effect of TC on the antioxidant defense system in catfish. In this study, we aimed to investigate the response of the catfish antioxidant defense system following TC feeding as well as E. ictaluri infection. In the first experiment, catfish fingerlings were fed with a basal diet or a basal diet supplemented with TC (20 mg/kg diet) for 10 days, and the level of five oxidative stress biomarkers were measured in the hepatic tissue. Compared with the control group, superoxide dismutase (SOD) activity was increased significantly and the malondialdehyde (MDA) concentration decreased significantly (P < 0.001) in hepatic tissue of catfish that were fed a TC-supplemented diet. Whereas activities of catalase (CAT) and reduced glutathione (GSH) as well as nitric oxide (NO) concentration did not show significant differences between TC and control groups. In the second experiment, catfish fingerlings were fed a TC-supplemented or normal diet followed by infection with E. ictaluri, and the activities of oxidative biomarkers were measured on 1, 6, and 14-days post-infection (dpi). Significant (P < 0.001) increases in CAT, SOD, and GSH activities were observed in catfish fed TC when compared with those fish fed a normal diet on 1, 6, and 14 dpi. A significant (P < 0.001) decrease in NO and MDA concentrations were found in catfish that received a TC diet compared to the control group at 1, 6, and 14 dpi. In conclusion, dietary TC improved the oxidative stress response in catfish following E. ictaluri challenge. These results provide information regarding the mechanisms by which TC provides protection against E. ictaluri infection.© 2020 Elsevier B.V.

Allen PJ, Brokordt K, Oliva M, Alveal K, Flores H, Alvarez CA (2021) Physiological insights for aquaculture diversification: Swimming capacity and efficiency, and metabolic scope for activity in cojinoba Seriolella violacea. Aquaculture 531: 735968.

JOURNAL IMPACT INDEX: ‡ • DOI: 10.1016/j.aquaculture.2020.735968 • SCOPUS ID (EID): 2-s2.0-85092250322 • SCOPUS CITATION COUNT: 1

Aquaculture diversification is important for providing sustainable sources of food fish amidst changing environments, pathogens, economies, and market demand. Particularly for newly cultured species where information may be limited, optimization of culture practices relies on an understanding of the physiology and ecology of a species. The cojinoba (Seriolella violacea; Centrolophidae), a coastal pelagic marine fish, is a species of growing importance for aquaculture production in South America. Although methods for breeding and larval to juvenile rearing have been established, little is known about the physiology of this species. Therefore, measures of metabolism, swimming capacity and efficiency, red:white (R:W) muscle ratios, and associated aerobic and anaerobic biochemical parameters, such as plasma glucose and lactate, and muscle enzyme activities (i.e., pyruvate kinase, citrate synthase, electron transport system [ETS]), were measured. For cojinoba at 15 °C with mean body length (BL; total length) of 22 cm, critical swimming velocity (Ucrit) was approximately 80 cm/s or 3.8 BL/s, and optimal swimming velocity (Uopt) was 50 cm/s or 2.3 BL/s. Aerobic scope for metabolism was approximately 300 mg O2/kg/h, with Mo2 max 3.4 fold greater than standard metabolic rate. Swimming was facilitated by linear increases in tail beat frequency until burst and glide swimming initiated near Ucrit. At low velocities, large (~20% BL) pectoral fins were used for propulsion and maneuverability/maintaining equilibrium; beat frequency diminished rapidly with increasing velocity. Red:white muscle ratios at 50% BL and 75% BL (caudal peduncle) were comparable to other ectothermic species, with a greater proportion of red muscle in the caudal peduncle presumably corresponding to facilitation of sustained pelagic swimming. Plasma glucose and lactate were elevated at Ucrit by 20% and 45% respectively, indicating mobilization of anaerobic energy sources at fatigue. Aerobic enzyme activities were much higher in red muscle, the ratio of anaerobic:aerobic enzyme activity was higher in white muscle, and ETS activities decreased at fatigue in both red and white muscle. The cojinoba has a moderate metabolic rate compared to other pelagic species, displays shoaling behavior, is maneuverable at low velocities due to pectoral fin use, but has optimal swimming efficiencies at higher velocities. These factors are beneficial for designing culture systems to promote exercise benefits for growth and welfare. © 2020 Elsevier B.V.

Richardson BM, Griffin MJ, Colvin ME, Wise DJ, Ware C, Mischke CC, Greenway TE, Byars TS, Hanson LA, Lawrence ML (2021) Using quantitative polymerase chain reaction (qPCR) and occupancy models to estimate atypical Aeromonas hydrophila (aAh) prevalence in catfish. Aquaculture 530: 735687.

JOURNAL IMPACT INDEX: ‡ • DOI: 10.1016/j.aquaculture.2020.735687 • SCOPUS ID (EID): 2-s2.0-85088804196 • SCOPUS CITATION COUNT: 0

A strain of atypical Aeromonas hydrophila (aAh) has caused issues within the channel catfish Ictalurus punctatus industry of the southeastern United States since 2009. These atypical pathotypes cause acute mortality events resulting in catastrophic losses, as opposed to more chronic mortality and lesions seen in typical infections of motile aeromonas septicemia (MAS). This study provides a basic framework for rapid field sampling negating the need for re-isolation or enrichment culture, thereby reducing the time between sampling and detection. Rapid and accurate quantitative PCR based methods for detection of aAh have been described and are important confirmative tools in research and diagnostic settings. These methods also have application in epidemiological surveys investigating the spread of disease and elucidating pathogen dynamics that may lead to outbreaks. To date, no field-based sampling technique for rapid aAh detection in resident pond populations has been explored. In this study, culture swabs taken from the gills and lower intestine of pond-raised catfish were assessed for their suitability as rapid field-based collection methods for downstream applications. Results showed the state of the pond has a significant effect on which swab location yields the highest proportion of PCR positive results. During an active outbreak, gill swabs identified more fish as aAh-positive; however, in apparently healthy populations, swabs taken from the lower intestine identified significantly more aAh-positive fish than gill swabs, despite no statistical difference in the concentration of aAh cell equivalents between swab sites. Naïve prevalence estimates from the two swab types were compared to estimates provided by a hierarchical occupancy model. Prevalence estimates from gill swabs was 0.95% while vent swabs showed a prevalence of 2.2%; however, estimates based on the occupancy model were 6.6% and 9.8%, respectively. This multi-fold increase in prevalence estimates highlights the importance of accounting for imperfect detection in epidemiological studies and in assessing potential outbreak risk. Furthermore, occupancy models based on these data indicate resident fish can be aAh-positive carriers with no gross signs of infection, providing evidence aAh can reside in catfish ponds in the absence of disease. The presence of a carrier state indicates the pathogen may pose minimal risk to the host is compromised or a mechanical portal of entry into the blood stream is available. This provides an important direction for future research in understanding the mechanisms of aAh outbreaks in catfish aquaculture ponds. © 2020

Cui L, Chang SKC, Nannapaneni R (2021) Comparative studies on the effect of probiotic additions on the physicochemical and microbiological properties of yoghurt made from soymilk and cow's milk during refrigeration storage (R2). Food Control 119: 107474.

JOURNAL IMPACT INDEX: ‡ • DOI: 10.1016/j.foodcont.2020.107474 • SCOPUS ID (EID): 2-s2.0-85088392441 • SCOPUS CITATION COUNT: 7

Zhang X, Elsayed I, Song X, Shmulsky R, Hassan EB (2020) Microporous carbon nanoflakes derived from biomass cork waste for CO2 capture. Science of the Total Environment 748: 142465.

JOURNAL IMPACT INDEX: 7.137 • DOI: 10.1016/j.scitotenv.2020.142465 • PMID: 33113689 • SCOPUS ID (EID): 2-s2.0-85091974998 • SCOPUS CITATION COUNT: 7

Raldua D, Casado M, Prats E, Faria M, Puig-Castellvi F, Perez Y, Alfonso I, Hsu C-Y, Arick-2nd MA, Garcia-Reyero N, Ziv T, Ben-Lulu S, Admon A, Pina B (2020) Targeting redox metabolism: the perfect storm induced by acrylamide poisoning in the brain. Scientific Reports 10(1): 312.

JOURNAL IMPACT INDEX: 4.149 • DOI: 10.1038/s41598-019-57142-y • PMID: 31941973 • SCOPUS ID (EID): 2-s2.0-85077941634 • SCOPUS CITATION COUNT: 5

Evans HC, Dinh TTN, Ugur MR, Hitit M, Sajeev D, Kaya A, Topper E, Nicodemus MC, Smith GD, Memili E (2020) Lipidomic markers of sperm cryotolerance in cattle. Scientific Reports 10(1): 20192.

JOURNAL IMPACT INDEX: 4.149 • DOI: 10.1038/s41598-020-77089-9 • PMID: 33214639 • SCOPUS ID (EID): 2-s2.0-85096308777 • SCOPUS CITATION COUNT: 4

Lawal HM, Schilde C, Kin K, Brown MW, James J, Prescott AR, Schaap P (2020) Cold climate adaptation is a plausible cause for evolution of multicellular sporulation in Dictyostelia. Scientific Reports 10(1): 8797.

JOURNAL IMPACT INDEX: 4.149 • DOI: 10.1038/s41598-020-65709-3 • PMID: 32472019 • SCOPUS ID (EID): 2-s2.0-85085694030 • SCOPUS CITATION COUNT: 1

Gomes FP, Park R, Viana AG, Fernandez-Costa C, Topper E, Kaya A, Memili E, Yates-3rd JR, Moura AA (2020) Protein signatures of seminal plasma from bulls with contrasting frozen-thawed sperm viability. Scientific Reports 10(1): 14661.

JOURNAL IMPACT INDEX: 4.149 • DOI: 10.1038/s41598-020-71015-9 • PMID: 32887897 • SCOPUS ID (EID): 2-s2.0-85090298046 • SCOPUS CITATION COUNT: 0

Catchot B, Anderson CJH, Gore J, Jackson R, Rakshit K, Musser F, Krishnan N (2020) Novaluron prevents oogenesis and oviposition by inducing ultrastructural changes in ovarian tissue of young adult Lygus lineolaris. Pest Management Science 76(12): 4057-4063.

JOURNAL IMPACT INDEX: 3.806 • DOI: 10.1002/ps.5960 • SCOPUS ID (EID): 2-s2.0-85087756041 • SCOPUS CITATION COUNT: 2

Pruett S, Tan W, Howell-3rd GE, Nanduri B (2020) Dosage scaling of alcohol in binge exposure models in mice: An empirical assessment of the relationship between dose, alcohol exposure, and peak blood concentrations in humans and mice. Alcohol 89: 9-17.

JOURNAL IMPACT INDEX: 2.474 • DOI: 10.1016/j.alcohol.2020.03.011 • PMID: 32259574 • SCOPUS ID (EID): 2-s2.0-85090042098 • SCOPUS CITATION COUNT: 7

Binge drinking is a remarkably prevalent behavior. In 2015, 27% of U.S. residents 18 years old or older reported at least one episode of binge drinking in the previous month. Rodent models for binge drinking are widely used to study the mechanisms by which alcohol causes a variety of adverse health effects in humans. Concerns have been raised that many binge-drinking studies in rodents involve alcohol doses that would be unrealistically high in humans. Allometric dosage scaling can be used to estimate the dose of a drug or chemical in mice that would be necessary to achieve similar biological effects at a realistic dose in humans. However, it has become apparent that no single allometric conversion factor is applicable for all drugs and chemicals, so it is necessary to evaluate each compound empirically. In the present study, we compared the area under the blood alcohol concentration vs. time curve (AUC) and the peak blood alcohol concentration following oral alcohol administration at various doses in mice and humans, using data from previously published studies. The results demonstrated that the oral dose of alcohol must be larger in mice (on a g of alcohol to kg of body weight basis) than in humans to achieve similar alcohol AUC values or to achieve similar peak concentrations in the blood. The dose required in mice was about 2-fold greater than the dose required in humans to achieve similar alcohol AUC and peak concentrations. The results shown here were substantially different from the average 5–12-fold difference between mice and humans calculated in previous studies using agents other than alcohol. Results shown here demonstrate that an empirical approach using data from several independent experiments provides information needed to determine the alcohol dose in mice that produces a similar level of exposure (AUC and peak concentration) as in humans. The results indicate that a single alcohol dose in the range of 5–6 g/kg, a range often used in mouse models for binge drinking, is not excessive when modeling human binge drinking. Results presented here illustrate that in mice both alcohol AUC and peak alcohol concentration correlate well with an important biological effect – activation of the hypothalamic-pituitary-adrenal axis – as indicated by increased corticosterone AUC values. © 2020 Elsevier Inc.

Kuhn JH, Adkins S, Alioto D, Alkhovsky SV, Amarasinghe GK, Anthony SJ, Avsic-Zupanc T, Ayllon MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Bartonicka T, Basler C, Bavari S, Beer M, Bente DA, Bergeron E, Bird BH, Blair C, Blasdell KR, Bradfute SB, Breyta R, Briese T, Brown PA, Buchholz UJ, Buchmeier MJ, Bukreyev A, Burt F, Buzkan N, Calisher CH, Cao M, Casas I, Chamberlain J, Chandran K, Charrel RN, Chen B, Chiumenti M, Choi I-R, Clegg JCS, Crozier I, da Graca JV, Dal Bo E, Dávila AMR, de la Torre JC, de Lamballerie X, de Swart RL, Di Bello PL, Di Paola N, Di Serio F, Dietzgen RG, Digiaro M, Dolja VV, Dolnik O, Drebot MA, Drexler JF, Durrwald R, Dufkova L, Dundon WG, Duprex WP, Dye JM, Easton AJ, Ebihara H, Elbeaino T, Ergunay K, Fernandes J, Fooks AR, Formenty PBH, Forth LF, Fouchier RAM, Freitas-Astua J, Gago-Zachert S, Gao GF, Garcia ML, Garcia-Sastre A, Garrison AR, Gbakima A, Goldstein T, Gonzalez J-PJ, Griffiths A, Groschup MH, Gunther S, Guterres A, Hall RA, Hammond J, Hassan M, Hepojoki J, Hepojoki S, Hetzel U, Hewson R, Hoffmann B, Hongo S, Hoper D, Horie M, Hughes HR, Hyndman TH, Jambai A, Jardim R, Jiang D, Jin Q, Jonson GB, Junglen S, Karadag S, Keller KE, Klempa B, Klingstrom J, Kobinger G, Kondo H, Koonin EV, Krupovic M, Kurath G, Kuzmin IV, Laenen L, Lamb RA, Lambert AJ, Langevin SL, Lee B, Lemos ERS, Leroy EM, Li D, Li J, Liang M, Liu W, Liu Y, Lukashevich IS, Maes P, Marciel de Souza W, Marklewitz M, Marshall SH, Martelli GP, Martin RR, Marzano S-YL, Massart S, McCauley JW, Mielke-Ehret N, Minafra A, Minutolo M, Mirazimi A, Muhlbach H-P, Muhlberger E, Naidu R, Natsuaki T, Navarro B, Navarro JA, Netesov SV, Neumann G, Nowotny N, Nunes MRT, Nylund A, Okland AL, Oliveira RC, Palacios G, Pallas V, Palyi B, Papa A, Parrish CR, Pauvolid-Correa A, Paweska JT, Payne S, Perez DR, Pfaff F, Radoshitzky SR, Rahman A-U, Ramos-Gonzalez PL, Resende RO, Reyes CA, Rima BK, Romanowski V, Robles Luna G, Rota P, Rubbenstroth D, Runstadler JA, Ruzek D, Sabanadzovic S, Salat J, Sall AA, Salvato MS, Sarpkaya K, Sasaya T, Schwemmle M, Shabbir MZ, Shi X, Shí Z, Shirako Y, Simmonds P, Sirmarova J, Sironi M, Smither S, Smura T, Song J-W, Spann KM, Spengler JR, Stenglein MD, Stone DM, Strakova P, Takada A, Tesh RB, Thornburg NJ, Tomonaga K, Tordo N, Towner JS, Turina M, Tzanetakis I, Ulrich RG, Vaira AM, van den Hoogen B, Varsani A, Vasilakis N, Verbeek M, Wahl V, Walker PJ, Wang H, Wang J, Wang X, Wang L-F, Wei T, Wells H, Whitfield AE, Williams JV, Wolf YI, Wu Z, Yang X, Yang X, Yu X, Yutin N, Zerbini FM, Zhang T, Zhang Y-Z, Zhou G, Zhou X (2020) 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales. Archives of Virology 165(12): 3023-3072.

JOURNAL IMPACT INDEX: 2.283 • DOI: 10.1007/s00705-020-04731-2 • PMID: 32888050 • SCOPUS ID (EID): 2-s2.0-85090299667 • SCOPUS CITATION COUNT: 43

Campbell Y, Shao W, Dinh T, To K, Rogers W, Zhang X, Phillips T, Schilling W (2020) Use of nets treated with food grade coatings on controlling mold growth and mite infestation in dry-cured ham aging facilities. Journal of Stored Products Research 89: 101716.

JOURNAL IMPACT INDEX: 2.235 • DOI: 10.1016/j.jspr.2020.101716 • SCOPUS ID (EID): 2-s2.0-85090897168 • SCOPUS CITATION COUNT: 1

Ravichandran A, Escano J, Lee JH, Ross MK, Austin F, Orugunty R, Lu S-E, Smith L (2020) Formulation, Pharmacological Evaluation, and Efficacy Studies of Occidiofungin, a Novel Antifungal. Antimicrobial Agents and Chemotherapy 64(12): e01737-20.

JOURNAL IMPACT INDEX: 4.921 • DOI: 10.1128/AAC.01737-20 • PMID: 32958713 • SCOPUS ID (EID): 2-s2.0-85096358919 • SCOPUS CITATION COUNT: 1

Liao SF, Hasan MS, Yang Z, Stevens AW, Brett J, Peng Z (2020) Feeding arsenic-containing rice bran to growing pigs: Growth performance, arsenic tissue distribution, and arsenic excretion. International Journal of Environmental Research and Public Health 17(22): 1-14.

JOURNAL IMPACT INDEX: 3.18 • DOI: 10.3390/ijerph17228530 • PMID: 33213038 • SCOPUS ID (EID): 2-s2.0-85096160863 • SCOPUS CITATION COUNT: 0

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About Journal Impact Indexes

The IGBB is supported, in part, by the following units:

Missisippi Agricultural & Forestry Experiment Station - MAFES

Office of Research & Economic Development - ORED

Division of Agriculture, Forestry & Veterinary Medicine - DAFVM

The IGBB is an HPC² member center.