While the IGBB Service Center can perform low-risk, fairly routine biomolecular tasks on a fee-per-service basis, some of your research goals may require (or would most readily be completed with) the help of professionals trained in advanced procedures and/or data analysis techniques. The IGBB research associates, most of whom have Ph.D. degrees and/or many years of practical experience, can be hired to conduct research tasks associated with their specialties. For example, let's say you need an expert in RNA isolation and RNAseq to help you complete a portion of a research project. You could train a student or postdoc to become proficient in these research tasks, but you may not have the experience, time, or money to train someone. Moreover, you may not have the instrumentation you need to do the research correctly. This is where the IGBB can help. Rather than training someone new, you can hire a highly skilled IGBB scientist to perform the research for you. The savings in cost and time is tremendous! The process works like this:
- The principal investigator (PIs) interested in determining whether
the IGBB can help them in their research/analyses contacts one of the IGBB's Research Leads.
- The Research Lead(s) sets up a meeting with the PI to discuss project goals, feasibility, and
approaches. This consultation is free.
- If the PI and the Research Lead agree to a research plan, the
will generate an itemized quote for the PI that includes salary, fringe, reagent
costs, machine costs, etc. The duration of the employment agreement depends upon the needs of the customer and can range from a few hours to several months. In addition, IGBB employment agreements can cover fairly low weekly time committments spread out over long stretches (e.g., a customer may hire an IGBB employee to work on a project 5 hours a week for four years). Overhead charges and/or HPC² retainage costs may or may not be
applicable. Once a plan is set between a PI and an IGBB Research Lead, a final quote will be sent to the PI for approval. Once the PI approves the quote, work can begin.
If you don't have funding in hand, but are working on a grant proposal, you can include the participation of an IGBB expert-for-hire in your proposal budget (note: you must make such agreements with the expert-for-hire through a MyIGBB itemized quote). To discuss a hiring an IGBB expert, please contact one of the IGBB's Research Leads by phone or e-mail.
PIs are asked to consider whether the participation of an IGBB employee in a project merits that employee's inclusion as a co-author on a resulting manuscript(s). The decision ultimately lies with the PI. However, the IGBB encourages IGBB staff and faculty involved in Proposal Partnerships
and Experts for Hire
to discuss/negotiate co-authorship with PIs before starting work on a project.
Clustering of high throughput gene expression data
IGBB Authors:Andy D. Perkins, Cetin Yuceer
PUBLICATION YEAR: 2012
IMPACT FACTOR: 3.372
CITATION COUNT: 84
Pirim H, Eksioglu B, Perkins AD, Yuceer C (2012) Clustering of high throughput gene expression data. Computers & Operations Research
: DOWNLOAD PDFABSTRACT
High throughput biological data need to be processed, analyzed, and interpreted to address problems in life sciences. Bioinformatics, computational biology, and systems biology deal with biological problems using computational methods. Clustering is one of the methods used to gain insight into biological processes, particularly at the genomics level. Clearly, clustering can be used in many areas of biological data analysis. However, this paper presents a review of the current clustering algorithms designed especially for analyzing gene expression data. It is also intended to introduce one of the main problems in bioinformatics - clustering gene expression data - to the operations research community. -¬ 2012 Elsevier Ltd. All rights reserved.
Dr. Daniel G. Peterson (Dan)
Director & Professor
The IGBB is supported, in part, by the following units:
The IGBB is an HPC² member center.