Peer-Reviewed Publications

Suga H, Torruella G, Burger G, Brown MW, Ruiz-Trillo I (2014) Earliest Holozoan expansion of phosphotyrosine signaling. Molecular Biology and Evolution 31(3): 517-528. DOI: 10.1093/molbev/mst241 • SCOPUS ID: 2-s2.0-84895771214 • SCOPUS CITATION COUNT: 38

Kudryavtsev A, Brown MW, Tice A, Spiegel FW, Pawlowski J, Anderson OR (2014) A revision of the order Pellitida Smirnov et al., 2011 (Amoebozoa, Discosea) based on ultrastructural and molecular evidence, with description of Endostelium crystalliferum n. sp. Protist 165(2): 208-229. DOI: 10.1016/j.protis.2014.02.003 • SCOPUS ID: 2-s2.0-84897433915 • SCOPUS CITATION COUNT: 28

Arroyo JI, Hoffmann FG, Opazo JC (2014) Evolution of the relaxin/insulin-like gene family in anthropoid primates. Genome Biology and Evolution 6(3): 491-499. DOI: 10.1093/gbe/evu023 • SCOPUS ID: 2-s2.0-84902992924 • SCOPUS CITATION COUNT: 12

Dahal N, Abdelhamed H, Lu J, Karsi A, Lawrence ML (2014) Effect of multiple mutations in tricarboxylic acid cycle and one-carbon metabolism pathways on Edwardsiella ictaluri pathogenesis. Veterinary Microbiology 169(1-2): 107-112. DOI: 10.1016/j.vetmic.2013.12.006 • SCOPUS ID: 2-s2.0-84895067776 • SCOPUS CITATION COUNT: 9

Yang J, Grunewald S, Xu Y, Wan XF (2014) Quartet-based methods to reconstruct phylogenetic networks. BMC Systems Biology 8: 21. DOI: 10.1186/1752-0509-8-21 • SCOPUS ID: 2-s2.0-84895146142 • SCOPUS CITATION COUNT: 20

Nallamilli BR, Edelmann MJ, Zhong X, Tan F, Mujahid H, Zhang J, Nanduri B, Peng Z (2014) Global analysis of lysine acetylation suggests the involvement of protein acetylation in diverse biological processes in rice (Oryza sativa). PLoS ONE 9(2): e89283. DOI: 10.1371/journal.pone.0089283 • SCOPUS ID: 2-s2.0-84876588998 • SCOPUS CITATION COUNT: 99

Berninger JP, Martinovic-Weigelt D, Garcia-Reyero N, Escalon L, Perkins EJ, Ankley GT, Villeneuve DL (2014) Using transcriptomic tools to evaluate biological effects across effluent gradients at a diverse set of study sites in Minnesota, USA. Environmental Science and Technology 48(4): 2404-2412. DOI: 10.1021/es4040254 • SCOPUS ID: 2-s2.0-84894278957 • SCOPUS CITATION COUNT: 34

Paul D, Magbanua Z, Arick M, French T, Bridges SM, Burgess SC, Lawrence ML (2014) Genome Sequence of the Oleaginous Yeast Rhodotorula glutinis ATCC 204091. Genome Announcements 2(1): e0004614. DOI: 10.1128/genomeA.00046-14 • SCOPUS CITATION COUNT:

Garcia-Reyero N, Escalon BL, Prats E, Stanley JK, Thienpont B, Melby NL, Baron E, Eljarrat E, Barcelo D, Mestres J, Babin PJ, Perkins EJ, Raldua D (2014) Effects of BDE-209 contaminated sediments on zebrafish development and potential implications to human health. Environmental International 63: 216-223. DOI: 10.1016/j.envint.2013.11.012 • SCOPUS ID: 2-s2.0-84889592958 • SCOPUS CITATION COUNT: 50

Mali I, Vandewege MW, Davis SK, Forstner MR (2014) Magnitude of the freshwater turtle exports from the US: long term trends and early effects of newly implemented harvest management regimes. PLoS ONE 9(1): e86478. DOI: 10.1371/journal.pone.0086478 • SCOPUS ID: 2-s2.0-84900303812 • SCOPUS CITATION COUNT: 36

Fox SE, Geniza M, Hanumappa M, Naithani S, Sullivan C, Preece J, Tiwari VK, Elser J, Leonard JM, Sage A, Gresham C, Kerhornou A, Bolser D, McCarthy F, Kersey P, Lazo GR, Jaiswal P (2014) De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum. PLoS ONE 9(5): e96855. DOI: 10.1371/journal.pone.0096855 • SCOPUS ID: 2-s2.0-84880828284 • SCOPUS CITATION COUNT: 57

Myles V, Liao J, Warnock JN (2014) Cyclic pressure and angiotensin II influence the biomechanical properties of aortic valves. Journal of Biomechanical Engineering 136(1): 11011. DOI: 10.1115/1.4026041 • SCOPUS ID: 2-s2.0-84890074800 • SCOPUS CITATION COUNT: 7

Peterson DG (2014) Evolution of Plant Genome Analysis. Advances in Botanical Research 69(2): 13-46. DOI: 10.1016/B978-0-12-417163-3.00002-0 • SCOPUS ID: 2-s2.0-84890767772 • SCOPUS CITATION COUNT: 3

Reddy S, Lawrence ML (2014) Virulence characterization of Listeria monocytogenes. Methods in Molecular Biology 1157: 157-165. DOI: 10.1007/978-1-4939-0703-8_13 • SCOPUS ID: 2-s2.0-84922012776 • SCOPUS CITATION COUNT: 7

Johnson JB, Roberts JH, King TL, Edwards JW, Ford WM, Ray DA (2014) Genetic structuring of northern myotis (Myotis septentrionalis) at multiple spatial scales. Acta Theriologica 59(2): 223-231. DOI: 10.1007/s13364-013-0163-8 • SCOPUS ID: 2-s2.0-84896503740 • SCOPUS CITATION COUNT: 7

Castoe TA, de Koning APJ, Hall KT, Card DC, Shield DR, Fujita MK, Ruggiero RP, Degner JF, Daza JM, Gu W, Reyes-Velasco J, Shaney KJ, Castoe JM, Fox SE, Poole AW, Polanco D, Dobry J, Vandewege MW, Li Q, Schott RK, Kapusta A, Minx P, Feschotte C, Uetz P, Ray DA, Hoffmann FG, Bogden R, Smith EN, Chang BSW, Vonk FJ, Casewell NR, Henkel CV, Richardson MK, Mackessy SP, Bronikowsi AM, Yandell M, Warren WC, Secor SM, Pollock DD (2013) The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proceedings of the National Academy of Sciences of the United States of America 110(51): 20645-20650. DOI: 10.1073/pnas.1314475110 • SCOPUS ID: 2-s2.0-84890812848 • SCOPUS CITATION COUNT: 227

Deng X, Nanduri B, Tan W, Cheng B, Fan R, Pruett SB (2013) Sodium methyldithiocarbamate exerts broad inhibition of cellular signaling and expression of effector molecules of inflammation. Toxicological Sciences 136(2): 430-442. DOI: 10.1093/toxsci/kft196 • SCOPUS ID: 2-s2.0-84890412153 • SCOPUS CITATION COUNT: 5

Huang X, Bruce B, Buchan A, Congdon CB, Cramer CL, Jennings SF, Jiang H, Li Z, McClure G, McMullen R, Moore JH, Nanduri B, Peckham J, Perkins A, Polson SW, Rekepalli B, Salem S, Specker J, Wunsch D, Xiong D, Zhang S, Zhao Z (2013) No-boundary thinking in bioinformatics research. BioData Mining 6(1): 19. DOI: 10.1186/1756-0381-6-19 • SCOPUS ID: 2-s2.0-84887091707 • SCOPUS CITATION COUNT: 12

Ye J, Xu Y, Harris J, Sun H, Bowman AS, Cunningham F, Cardona C, Yoon KJ, Slemons RD, Wan XF (2013) Mutation from arginine to lysine at the position 189 of hemagglutinin contributes to the antigenic drift in H3N2 swine influenza viruses. Virology 446(1-2): 225-229. DOI: 10.1016/j.virol.2013.08.004 • SCOPUS ID: 2-s2.0-84884562314 • SCOPUS CITATION COUNT: 15

Gottula J, Lapato D, Cantilina K, Saito S, Bartlett B, Fuchs M (2013) Genetic Variability, Evolution, and Biological Effects of Grapevine fanleaf virus Satellite RNAs. Phytopathology 103(11): 1180-1187. DOI: 10.1094/PHYTO-11-12-0310-R • SCOPUS ID: 2-s2.0-84880439930 • SCOPUS CITATION COUNT: 20