Peer-Reviewed Publications

Wang R, Borazjani A, Matthews AT, Mangum LC, Edelmann MJ, Ross MK (2013) Identification of palmitoyl protein thioesterase 1 in human THP1 monocytes and macrophages and characterization of unique biochemical activities for this enzyme. Biochemistry 52(43): 7559-7574. DOI: 10.1021/bi401138s • SCOPUS ID: 2-s2.0-84887126250 • SCOPUS CITATION COUNT: 45

Brown MW, Sharpe SC, Silberman JD, Heiss AA, Lang BF, Simpson AG,Roger AJ (2013) Phylogenomics demonstrates that breviate flagellates are related to opisthokonts and apusomonads. Proceedings of the Royal Society B: Biological Sciences 280(1769): 20131755. DOI: 10.1098/rspb.2013.1755 • SCOPUS ID: 2-s2.0-84892577995 • SCOPUS CITATION COUNT: 113

Damsgaard C, Storz JF, Hoffmann FG, Fago A (2013) Hemoglobin isoform differentiation and allosteric regulation of oxygen binding in the turtle, Trachemys scripta. American Journal of Physiology - Regulatory integrative and Comparative Physiology 305(8): R961-R967. DOI: 10.1152/ajpregu.00284.2013 • SCOPUS ID: 2-s2.0-84885655415 • SCOPUS CITATION COUNT: 38

Thekke-Veetil T, Aboughanem-Sabanadzovic N, Keller KE, Martin RR, Sabanadzovic S, Tzanetakis IE (2013) Molecular characterization and population structure of blackberry vein banding associated virus, new ampelovirus associated with yellow vein disease. Virus Research 178(2): 234-240. DOI: 10.1016/j.virusres.2013.09.039 • SCOPUS ID: 2-s2.0-84888205344 • SCOPUS CITATION COUNT: 22

Takac T, Pechan T, Samajova O, Samaj J (2013) Vesicular Trafficking and Stress Response Coupled to PI3K Inhibition by LY294002 as Revealed by Proteomic and Cell Biological Analysis. Journal of Proteome Research 12(10): 4435-4448. DOI: 10.1021/pr400466x • SCOPUS ID: 2-s2.0-84885233035 • SCOPUS CITATION COUNT: 35

Lavoie CA, Platt RN, Novick PA, Counterman BA, Ray DA (2013) Transposable element evolution in Heliconius suggests genome diversity within Lepidoptera. Mobile DNA 4(1): 21. DOI: 10.1186/1759-8753-4-21 • SCOPUS ID: 2-s2.0-84884748768 • SCOPUS CITATION COUNT: 38

Ivanchenko MG, den Os D, Monshausen GB, Dubrovsky JG, Bednarova A,Krishnan N (2013) Auxin increases the hydrogen peroxide (H2O2) concentration in tomato (Solanum lycopersicum) root tips while inhibiting root growth. Annals of Botany 112(6): 1107-1116. DOI: 10.1093/aob/mct181 • SCOPUS ID: 2-s2.0-84884995593 • SCOPUS CITATION COUNT: 101

Manda P, McCarthy F, Bridges SM (2013) Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships. Journal of Biomedical Informatics 46(5): 849-856. DOI: 10.1016/j.jbi.2013.06.012 • SCOPUS ID: 2-s2.0-84883772644 • SCOPUS CITATION COUNT: 30

Garcia-Reyero N, Martyniuk CJ, Kroll KJ, Escalon BL, Spade DJ, Denslow ND (2013) Transcriptional signature of progesterone in the fathead minnow ovary (Pimephales promelas). General and Comparative Endocrinology 192: 159-169. DOI: 10.1016/j.ygcen.2013.06.008 • SCOPUS ID: 2-s2.0-84884415684 • SCOPUS CITATION COUNT: 15

Wan XF, Carrel M, Long LP, Alker AP, Emch M (2013) Perspective on emergence and re-emergence of amantadine resistant influenza A viruses in domestic animals in China. Infection, Genetics and Evolution 20C: 298-303. DOI: 10.1016/j.meegid.2013.09.004 • SCOPUS ID: 2-s2.0-84885041101 • SCOPUS CITATION COUNT: 18

Nanduri B, Pendarvis K, Shack LA, Kumar R, Clymer JW, Korvick DL, Burgess SC (2013) Ultrasonic incisions produce less inflammatory mediator response during early healing than electrosurgical incisions. PLoS ONE 8(9): e73032. DOI: 10.1371/journal.pone.0073032 • SCOPUS ID: 2-s2.0-84884223718 • SCOPUS CITATION COUNT: 10

Perkins EJ, Ankley GT, Crofton KM, Garcia-Reyero N, Lalone CA, Johnson MS, Tietge JE, Villeneuve DL (2013) Current perspectives on the use of alternative species in human health and ecological hazard assessments. Environmental Health Perspectives 121(9): 1002-1010. DOI: 10.1289/ehp.1306638 • SCOPUS ID: 2-s2.0-84883283839 • SCOPUS CITATION COUNT: 88

Yang G, Li S, Blackmon S, Ye J, Bradley KC, Cooley J, Smith D, Hanson L, Cardona C, Steinhauer D, Webby R, Liao M, Wan XF (2013) Mutation tryptophan to leucine at the position 222 of hemagglutinin could facilitate H3N2 influenza A virus infection in dogs. Journal of General Virology 94(Pt 12): 2599-2608. DOI: 10.1099/vir.0.054692-0 • SCOPUS ID: 2-s2.0-84887557276 • SCOPUS CITATION COUNT: 38

McIntosh CT, Warnock JN (2013) Side-specific characterization of aortic valve endothelial cell adhesion molecules under cyclic strain. Journal of Heart Valve Disease 22(5): 631-639. SCOPUS ID: 2-s2.0-84892871506 • SCOPUS CITATION COUNT: 7

Feng ZX, Wei YN, Li GL, Lu XM, Wan XF, Pharr GT, Wang ZW, Kong M, Gan Y, Bai FF, Liu MJ, Xiong QY, Wu XS, Shao GQ (2013) Development and validation of an attenuated Mycoplasma hyopneumoniae aerosol vaccine. Veterinary Microbiology 167(3-4): 417-424. DOI: 10.1016/j.vetmic.2013.08.012 • SCOPUS ID: 2-s2.0-84888051836 • SCOPUS CITATION COUNT: 34

Campos B, Garcia-Reyero N, Rivetti C, Escalon L, Habib T, Tauler R, Tsakovski S, Pina B, Barata C (2013) Identification of Metabolic Pathways in Daphnia magna Explaining Hormetic Effects of Selective Serotonin Reuptake Inhibitors and 4-Nonylphenol Using Transcriptomic and Phenotypic Responses. Environmental Science and Technology 47(16): 9434-9443. DOI: 10.1021/es4012299 • SCOPUS ID: 2-s2.0-84882733209 • SCOPUS CITATION COUNT: 65

Stanley JK, Perkins EJ, Habib T, Sims JG, Chappell P, Escalon BL, Wilbanks M, Garcia-Reyero N (2013) The Good, the Bad, and the Toxic: Approaching Hormesis in Daphnia magna Exposed to an Energetic Compound. Environmental Science and Technology 47(16): 9424-9433. DOI: 10.1021/es401115q • SCOPUS ID: 2-s2.0-84882710956 • SCOPUS CITATION COUNT: 53

Supple MA, Hines HM, Dasmahapatra KK, Lewis JJ, Nielsen DM, Lavoie C, Ray DA, Salazar C, McMillan WO, Counterman BA (2013) Genomic architecture of adaptive color pattern divergence and convergence in Heliconius butterflies. Genome Research 23(8): 1248-1257. DOI: 10.1101/gr.150615.112 • SCOPUS ID: 2-s2.0-84881119383 • SCOPUS CITATION COUNT: 57

Bensch S, Hellgren O, Krizanauskiene A, Palinauskas V, Valkiunas G, Outlaw D, Ricklefs RE (2013) How can we determine the molecular clock of malaria parasites?. Trends in Parasitology 29(8): 363-369. DOI: 10.1016/j.pt.2013.03.011 • SCOPUS ID: 2-s2.0-84880963227 • SCOPUS CITATION COUNT: 45

Wan H, Gao J, Xu K, Chen H, Couzens LK, Rivers KH, Easterbrook JD, Yang K, Zhong L, Rajabi M, Ye J, Sultana I, Wan XF, Liu X, Perez DR, Taubenberger JK,Eichelberger MC (2013) Molecular basis for broad neuraminidase immunity: conserved epitopes in seasonal and pandemic H1N1 as well as H5N1 influenza viruses. Journal of Virology 87(16): 9290-9300. DOI: 10.1128/JVI.01203-13 • SCOPUS ID: 2-s2.0-84881237033 • SCOPUS CITATION COUNT: 122