Peer-Reviewed Publications

Dasmahapatra KK, Walters JR, Briscoe AD, Davey JW, Whibley A, Nadeau NJ, Zimin AV, Hughes DST, Ferguson LC, Martin SH, Salazar C, Lewis JJ, Adler S, Ahn SJ, Baker DA, Baxter SW, Chamberlain NL, Chauhan R, Counterman BA, Dalmay T, Gilbert LE, Gordon K, Heckel DG, Hines HM, Hoff KJ, Holland PWH, Jacquin-Joly E, Jiggins FM, Jones RT, Kapan DD, Kersey P, Lamas G, Lawson D, Mapleson D, Maroja LS, Martin A, Moxon S, Palmer WJ, Papa R, Papanicolaou A, Pauchet Y, Ray DA, Rosser N, Salzberg SL, Supple MA, Surridge A, Tenger-Trolander A, Vogel H, Wilkinson PA, Wilson D, Yorke JA, Yuan F, Balmuth AL, Eland C, Gharbi K, Thomson M, Gibbs RA, Han Y, Jayaseelan JC, Kovar C, Mathew T, Muzny DM, Ongeri F, Pu LL, Qu J, Thornton RL, Worley KC, Wu YQ, Linares M, Blaxter ML, Ffrench-Constant RH, Joron M, Kronforst MR, Mullen SP, Reed RD, Scherer SE, Richards S, Mallet J, Owen McMillan W, Jiggins CD (2012) Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature 487(7405): 94-98. DOI: 10.1038/nature11041 • SCOPUS ID: 2-s2.0-84863496231 • SCOPUS CITATION COUNT: 873

Hoffmann FG, Opazo JC, Hoogewijs D, Hankeln T, Ebner B, Vinogradov SN, Bailly X, Storz JF (2012) Evolution of the globin gene family in deuterostomes: lineage-specific patterns of diversification and attrition. Molecular Biology and Evolution 29(7): 1735-1745. DOI: 10.1093/molbev/mss018 • SCOPUS ID: 2-s2.0-84862220580 • SCOPUS CITATION COUNT: 46

Zhou F, Wang G, Buchy P, Cai Z, Chen H, Chen Z, Cheng G, Wan XF, Deubel V, Zhou P (2012) A triclade DNA vaccine designed on the basis of a comprehensive serologic study elicits neutralizing antibody responses against all clades and subclades of highly pathogenic avian influenza H5N1 Viruses. Journal of Virology 86(12): 6970-6978. DOI: 10.1128/JVI.06930-11 • SCOPUS ID: 2-s2.0-84863994618 • SCOPUS CITATION COUNT: 41

Adedeji OB, Durhan EJ, Garcia-Reyero N, Kahl MD, Jensen KM, Lalone CA, Makynen EA, Perkins EJ, Thomas L, Villeneuve DL, Ankley GT (2012) Short-term study investigating the estrogenic potency of diethylstilbesterol in the fathead minnow (Pimephales promelas). Environmental Science and Technology 46(14): 7826-7835. DOI: 10.1021/es301043b • SCOPUS ID: 2-s2.0-84863938174 • SCOPUS CITATION COUNT: 24

Warner CM, Gust KA, Stanley JK, Habib T, Wilbanks MS, Garcia-Reyero N, Perkins EJ (2012) A systems toxicology approach to elucidate the mechanisms involved in RDX species-specific sensitivity. Environmental Science and Technology 46(14): 7790-7798. DOI: 10.1021/es300495c • SCOPUS ID: 2-s2.0-84863979561 • SCOPUS CITATION COUNT: 21

Desai MA, Soni KA, Nannapaneni R, Schilling MW, Silva JL (2012) Reduction of listeria monocytogenes biofilms on stainless steel and polystyrene surfaces by essential oils. Journal of Food Protection 75(7): 1332-1337. DOI: 10.4315/0362-028X.JFP-11-517 • SCOPUS ID: 2-s2.0-84863833778 • SCOPUS CITATION COUNT: 60

Dubey B, Meganathan PR, Haque I (2012) Complete mitochondrial genome sequence from an endangered Indian snake, Python molurus molurus (Serpentes, Pythonidae). Molecular Biology Reports 39(7): 7403-7412. DOI: 10.1007/s11033-012-1572-5 • SCOPUS ID: 2-s2.0-84864285367 • SCOPUS CITATION COUNT: 14

Peebles ED, Zhai W, Gerard PD (2012) Comparative evaluation of air cell and eggshell temperature measurement methodologies used in broiler hatching eggs during late incubation. Poultry Science 91(7): 1536-1541. DOI: 10.3382/ps.2011-01978 • SCOPUS ID: 2-s2.0-84862274032 • SCOPUS CITATION COUNT: 6

Pulikanti R, Peebles ED, Zhai W, Bennett LW, Gerard PD (2012) Physiological relationships of the early posthatch performance of broilers to their embryo and eggshell characteristics. Poultry Science 91(7): 1552-1557. DOI: 10.3382/ps.2011-02065 • SCOPUS ID: 2-s2.0-84862299044 • SCOPUS CITATION COUNT: 11

Valverde RA, Singh R, Sabanadzovic S (2012) Detection and identification of Clerodendron golden mosaic China virus in Salvia splendens. European Journal of Plant Pathology 133(3): 499-503. DOI: 10.1007/s10658-011-9923-y • SCOPUS ID: 2-s2.0-84861483388 • SCOPUS CITATION COUNT: 13

Tan W, Cooley J, Austin F, Lu SE, Pruett SB, Smith L (2012) Nonclinical toxicological evaluation of occidiofungin, a unique glycolipopeptide antifungal. International Journal of Toxicology 31(4): 326-336. DOI: 10.1177/1091581812445185 • SCOPUS ID: 2-s2.0-84864972666 • SCOPUS CITATION COUNT: 15

Takac T, Pechan T, Samajova O, Ovecka M, Richter H, Eck C, Niehaus K, Samaj J (2012) Wortmannin treatment induces changes in arabidopsis root proteome and Post-Golgi compartments. Journal of Proteome Research 11(6): 3127-3142. DOI: 10.1021/pr201111n • SCOPUS ID: 2-s2.0-84861833367 • SCOPUS CITATION COUNT: 45

Arroyo JI, Hoffmann FG, Opazo JC (2012) Gene turnover and differential retention in the relaxin/insulin-like gene family in primates. Molecular Phylogenetics and Evolution 63(3): 768-776. DOI: 10.1016/j.ympev.2012.02.011 • SCOPUS ID: 2-s2.0-84859826546 • SCOPUS CITATION COUNT: 12

Street J, Yu F, Wooten J, Columbus E, White MG, Warnock J (2012) Gasoline-range hydrocarbon production using biomass derived synthesis gas over Mo/H +ZSM-5. Fuel 96: 239-249. DOI: 10.1016/j.fuel.2011.12.036 • SCOPUS ID: 2-s2.0-84858278984 • SCOPUS CITATION COUNT: 13

Ross MK, Borazjani A, Wang R, Crow JA, Xie S (2012) Examination of the carboxylesterase phenotype in human liver. Archives of Biochemistry and Biophysics 522(1): 44-56. DOI: 10.1016/j.abb.2012.04.010 • SCOPUS ID: 2-s2.0-84861408917 • SCOPUS CITATION COUNT: 56

Dubey B, Meganathan PR, Vidal N, Haque I (2012) Molecular evidence for the nonmonophyly of the Asian natricid genus xenochrophis (Serpentes, Colubroidea) as inferred from mitochondrial and nuclear genes. Journal of Herpetology 46(2): 263-268. DOI: 10.1670/10-116 • SCOPUS ID: 2-s2.0-84863957922 • SCOPUS CITATION COUNT: 11

Platt RN, Ray DA (2012) A non-LTR retroelement extinction in Spermophilus tridecemlineatus. Gene 500(1): 47-53. DOI: 10.1016/j.gene.2012.03.051 • SCOPUS ID: 2-s2.0-84860335554 • SCOPUS CITATION COUNT: 24

Barnett JL, Yang J, Cai Z, Zhang T, Wan XF (2012) AntigenMap 3D: an online antigenic cartography resource. Bioinformatics 28(9): 1292-1293. DOI: 10.1093/bioinformatics/bts105 • SCOPUS ID: 2-s2.0-84860443531 • SCOPUS CITATION COUNT: 41

Tekedar HC, Karsi A, Gillaspy AF, Dyer DW, Benton NR, Zaitshik J, Vamenta S, Banes MM, Gulsoy N, Aboko-Cole M, Waldbieser GC, Lawrence ML (2012) Genome sequence of the fish pathogen Flavobacterium columnare ATCC 49512. Journal of Bacteriology 194(10): 2763-2764. DOI: 10.1128/JB.00281-12 • SCOPUS ID: 2-s2.0-84861364942 • SCOPUS CITATION COUNT: 46

Liu Z, Cai S, Swan JE, Moorhead RJ, Martin JP, Jankun-Kelly TJ (2012) A 2D Flow Visualization User Study Using Explicit Flow Synthesis and Implicit Task Design. IEEE Transactions on Visualization and Computer Graphics 18(5): 783-796. DOI: 10.1109/TVCG.2011.110 • SCOPUS ID: 2-s2.0-84862795743 • SCOPUS CITATION COUNT: 18