Peer-Reviewed Publications

Prewitt ML, Diehl SV, McElroy TC, Diehl WJ (2008) Comparison of general fungal and basidiomycete specific ITS primers for identification of wood decay fungi. Forest Products Journal 58(4): 66-71. SCOPUS ID: 2-s2.0-43749094263 • SCOPUS CITATION COUNT: 23

Kunec D, Hanson LA, van Haren S, Nieuwenhuizen IF, Burgess SC (2008) An overlapping bacterial artificial chromosome system that generates vectorless progeny for channel catfish herpesvirus. Journal of Virology 82(8): 3872-3881. DOI: 10.1128/JVI.02152-07 • SCOPUS ID: 2-s2.0-41949102870 • SCOPUS CITATION COUNT: 16

Saha S, Bridges SM, Magbanua ZV, Peterson DG (2008) Empirical comparison of ab initio repeat finding programs. Nucleic Acids Research 36(7): 2284-2294. DOI: 10.1093/nar/gkn064 • SCOPUS ID: 2-s2.0-42449106154 • SCOPUS CITATION COUNT: 260

Cooksey AM, Corzo A, Koter MD, Burgess SC (2008) Quantitative serum proteomics of tryptophan nutrition using bi-directional heavy oxygen labeling with a RuBisCO internal standard. Open Proteomics Journal 1: 27-39. DOI: 10.2174/1875039700801010027 • SCOPUS CITATION COUNT:

Mohan S, Ma PW, Williams WP, Luthe DS (2008) A naturally occurring plant cysteine protease possesses remarkable toxicity against insect pests and synergizes Bacillus thuringiensis toxin. PLoS ONE 3(3): e1786. DOI: 10.1371/journal.pone.0001786 • SCOPUS ID: 2-s2.0-44449121312 • SCOPUS CITATION COUNT: 59

Hawkins LK, Windham GL, Williams WP (2008) Occurrence of aflatoxin in three maize (Zea mays L.) hybrids over 5 years in Northern Mississippi. Mycopathologia 165(3): 165-171. DOI: 10.1007/s11046-007-9064-1 • SCOPUS ID: 2-s2.0-41049103833 • SCOPUS CITATION COUNT: 13

Li G, Nallamilli BR, Tan F, Peng Z (2008) Removal of high-abundance proteins for nuclear subproteome studies in rice (Oryza sativa) endosperm. Electrophoresis 29(3): 604-617. DOI: 10.1002/elps.200800166 • SCOPUS ID: 2-s2.0-59349107515 • SCOPUS CITATION COUNT: 73

Peddinti DS, Nanduri B, Kaya A, Feugang JM, Burgess SC, Memili E (2008) Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility. BMC Systems Biology 2: 19. DOI: 10.1186/1752-0509-2-19 • SCOPUS ID: 2-s2.0-42049123062 • SCOPUS CITATION COUNT: 239

Nanduri B, Lawrence ML, Peddinti DS, Burgess SC (2008) Effects of subminimum inhibitory concentrations of antibiotics on the Pasteurella multocida proteome: A systems approach. Comparative and Functional Genomics 2008: 254836. DOI: 10.1155/2008/254836 • SCOPUS ID: 2-s2.0-44449090491 • SCOPUS CITATION COUNT: 14

Saha S, Bridges SM, Magbanua ZV, Peterson DG (2008) Computational approaches and tools used in identification of dispersed repetitive DNA sequences. Tropical Plant Biology 1: 85-96. DOI: 10.1007/s12042-007-9007-5 • SCOPUS CITATION COUNT:

Chouvarine P, Saha S, Peterson DG (2008) An automated, high-throughput sequence read classification pipeline for preliminary genome characterization. Analytical Biochemistry 373(1): 78-87. DOI: 10.1016/j.ab.2007.08.008 • SCOPUS ID: 2-s2.0-37049006258 • SCOPUS CITATION COUNT: 4

Streit TM, Borazjani A, Lentz SE, Wierdl M, Potter PM, Gwaltney SR, Ross MK (2008) Evaluation of the 'side door' in carboxylesterase-mediated catalysis and inhibition. Biological Chemistry 389(2): 149-162. DOI: 10.1515/BC.2008.017 • SCOPUS ID: 2-s2.0-38649137308 • SCOPUS CITATION COUNT: 17

Felfoldi B, Pharr GT, Pinchuk LM, Cooksey AM, Thaxton JP (2008) Preliminary protein profile analysis of the late embryonic B-cell stages in the chicken bursa of Fabricius. International Journal of Poultry Science 7(2): 125-128. DOI: 10.3923/ijps.2008.117.124 • SCOPUS CITATION COUNT: 6

Buza TJ, McCarthy FM, Wang N, Bridges SM, Burgess SC (2008) Gene Ontology annotation quality analysis in model eukaryotes. Nucleic Acids Research 36(2): e12. DOI: 10.1093/nar/gkm1167 • SCOPUS ID: 2-s2.0-39149103734 • SCOPUS CITATION COUNT: 40

Corzo A, Dozier WA, Kidd MT (2008) Valine nutrient recommendations for Ross x Ross 308 broilers. Poultry Science 87(2): 335-338. DOI: 10.3382/ps.2007-00307 • SCOPUS ID: 2-s2.0-38849126907 • SCOPUS CITATION COUNT: 36

Dozier WA, Kerr BJ, Corzo A, Kidd MT, Weber TE, Bregendahl K (2008) Apparent metabolizable energy of glycerin for broiler chickens. Poultry Science 87(2): 317-322. DOI: 10.3382/ps.2007-00309 • SCOPUS ID: 2-s2.0-38849111978 • SCOPUS CITATION COUNT: 88

Karsi A, Howe K, Kirkpatrick TB, Wills R, Bailey RH, Lawrence ML (2008) Development of bioluminescent Salmonella strains for use in food safety. BMC Microbiology 8: 10. DOI: 10.1186/1471-2180-8-10 • SCOPUS ID: 2-s2.0-40149085562 • SCOPUS CITATION COUNT: 19

Langston MA, Perkins AD, Saxton AM, Scharff JA, Voy BH (2008) Innovative computational methods for transcriptomic data analysis: A case study in the use of FPT for practical algorithm design and implementation. Computer Journal 51(1): 26-38. DOI: 10.1093/comjnl/bxm003 • SCOPUS CITATION COUNT:

Hsu CY, An C, Saha S, Ma DP, Jenkins JN, Scheffler BE, Stelly DM (2008) Molecular and SNP characterization of two genomic specific transcription factor genes GhMyb8 and GhMyb10 in cotton species. Euphytica 159: 259-273. DOI: 10.1007/s10681-007-9485-4 • SCOPUS ID: 2-s2.0-36749015120 • SCOPUS CITATION COUNT: 15

Butcher JT, Simmons CA, Warnock JN (2008) Mechanobiology of the aortic heart valve. Journal of Heart Valve Disease 17(1): 62-73. SCOPUS ID: 2-s2.0-43749097872 • SCOPUS CITATION COUNT: 153